Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | SAMN05444679_102253 | Not Available | Negative | 730223 - 731446 | 44020.0 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444679_102254 | Not Available | Negative | 731481 - 731933 | 16907.3 |
| aspartate ammonia-lyase | SAMN05444679_102255 | Not Available | Positive | 732096 - 733520 | 51267.7 |
| uncharacterized protein, contains gyd domain | SAMN05444679_102256 | Not Available | Negative | 733543 - 733833 | 10222.3 |
| thioredoxin 1 | SAMN05444679_102257 | Not Available | Negative | 733983 - 734315 | 12146.8 |
| regulatory protein, fis family | SAMN05444679_102258 | Not Available | Negative | 734343 - 735455 | 39993.6 |
| carbon-monoxide dehydrogenase small subunit | SAMN05444679_102259 | Not Available | Positive | 735587 - 736081 | 17137.8 |
| carbon-monoxide dehydrogenase large subunit | SAMN05444679_102260 | Not Available | Positive | 736093 - 738474 | 85033.3 |
| carbon-monoxide dehydrogenase medium subunit | SAMN05444679_102261 | Not Available | Positive | 738498 - 739289 | 27286.9 |
| moxr-like atpase | SAMN05444679_102262 | Not Available | Positive | 739299 - 740228 | 34033.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
