Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, asnc family | SAMN05444679_102233 | Not Available | Negative | 713488 - 713955 | 17721.7 |
| d-amino-acid dehydrogenase | SAMN05444679_102234 | Not Available | Positive | 714055 - 715365 | 47386.0 |
| transcriptional regulator, gntr family | SAMN05444679_102235 | Not Available | Positive | 715434 - 716213 | 28943.7 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05444679_102236 | Not Available | Positive | 716210 - 716890 | 24735.7 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05444679_102237 | Not Available | Positive | 716890 - 717591 | 25106.2 |
| polar amino acid transport system atp-binding protein | SAMN05444679_102238 | Not Available | Positive | 717566 - 718327 | 27263.2 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_102239 | Not Available | Positive | 718367 - 719158 | 28690.8 |
| ribose 5-phosphate isomerase b | SAMN05444679_102240 | Not Available | Positive | 719184 - 719633 | 16015.1 |
| ribokinase | SAMN05444679_102241 | Not Available | Positive | 719630 - 720586 | 31791.3 |
| ketopantoate reductase | SAMN05444679_102242 | Not Available | Negative | 720593 - 721498 | 31470.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
