Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444679_102223 | Not Available | Negative | 703250 - 703864 | 22327.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444679_102224 | Not Available | Negative | 703900 - 704814 | 33412.6 |
| putative molybdopterin biosynthesis protein | SAMN05444679_102225 | Not Available | Negative | 705027 - 706121 | 39537.6 |
| tungstate transport system permease protein | SAMN05444679_102226 | Not Available | Positive | 706251 - 707000 | 25796.3 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444679_102227 | Not Available | Positive | 706997 - 707689 | 24813.4 |
| tungstate transport system substrate-binding protein | SAMN05444679_102228 | Not Available | Positive | 707686 - 708513 | 29031.5 |
| abc-type molybdate transport system, substrate-binding protein | SAMN05444679_102229 | Not Available | Positive | 708500 - 709315 | 27305.6 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN05444679_102230 | Not Available | Negative | 709336 - 709875 | 18903.8 |
| oxidoreductase molybdopterin binding domain-containing protein | SAMN05444679_102231 | Not Available | Negative | 709989 - 710498 | 18123.9 |
| hypothetical protein | SAMN05444679_102232 | Not Available | Positive | 711219 - 713474 | 78272.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
