Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_102213 | Not Available | Positive | 691882 - 693033 | 40325.7 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_102214 | Not Available | Positive | 693106 - 694134 | 36133.5 |
| amino acid/amide abc transporter membrane protein 2, haat family /amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444679_102215 | Not Available | Positive | 694131 - 695972 | 65540.2 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_102216 | Not Available | Positive | 695969 - 696718 | 27204.4 |
| co or xanthine dehydrogenase, mo-binding subunit | SAMN05444679_102217 | Not Available | Negative | 696719 - 698926 | 78438.6 |
| nicotinate dehydrogenase subunit a | SAMN05444679_102218 | Not Available | Negative | 698929 - 699399 | 16447.9 |
| hypothetical protein | SAMN05444679_102219 | Not Available | Positive | 699611 - 700207 | 21307.8 |
| dna-binding transcriptional regulator, gntr family | SAMN05444679_102220 | Not Available | Negative | 700204 - 700875 | 24460.4 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444679_102221 | Not Available | Negative | 700955 - 701950 | 35733.4 |
| trap transporter, dctm subunit | SAMN05444679_102222 | Not Available | Negative | 701983 - 703248 | 44418.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
