Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation protein | SAMN05444679_102203 | Not Available | Negative | 683111 - 683713 | 21340.7 |
| phenylacetic acid degradation protein paan | SAMN05444679_102204 | Not Available | Negative | 683730 - 685388 | 59015.6 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN05444679_102205 | Not Available | Positive | 685565 - 686368 | 27877.8 |
| acyl-coa thioesterase | SAMN05444679_102206 | Not Available | Positive | 686381 - 686818 | 15689.7 |
| phenylacetate-coa ligase | SAMN05444679_102207 | Not Available | Positive | 686837 - 688156 | 48709.5 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paaa | SAMN05444679_102208 | Not Available | Positive | 688169 - 689179 | 38148.4 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paab | SAMN05444679_102209 | Not Available | Positive | 689176 - 689466 | 11132.2 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paac | SAMN05444679_102210 | Not Available | Positive | 689477 - 690250 | 28338.7 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paad | SAMN05444679_102211 | Not Available | Positive | 690244 - 690768 | 18598.4 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN05444679_102212 | Not Available | Positive | 690765 - 691847 | 39672.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
