Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar transcriptional activator flhd | SAMN05444679_10158 | Not Available | Positive | 52980 - 53333 | 12668.6 |
| flagellar transcriptional activator flhc | SAMN05444679_10159 | Not Available | Positive | 53389 - 53997 | 22477.3 |
| chemotaxis protein mota | SAMN05444679_10160 | Not Available | Positive | 54079 - 54939 | 30897.2 |
| chemotaxis protein motb | SAMN05444679_10161 | Not Available | Positive | 54959 - 55897 | 34120.0 |
| chea signal transduction histidine kinase | SAMN05444679_10162 | Not Available | Positive | 55928 - 57973 | 72598.9 |
| eal and modified hd-gyp domain-containing signal transduction protein | SAMN05444679_10163 | Not Available | Positive | 57999 - 59327 | 48609.7 |
| chemotaxis protein methyltransferase cher | SAMN05444679_10164 | Not Available | Positive | 59394 - 60248 | 31832.3 |
| chemotaxis protein ched | SAMN05444679_10165 | Not Available | Positive | 60245 - 60853 | 21969.6 |
| response regulator receiver modulated cheb methylesterase | SAMN05444679_10166 | Not Available | Positive | 60850 - 61935 | 39004.6 |
| two-component system, chemotaxis family, response regulator chey | SAMN05444679_10167 | Not Available | Positive | 61964 - 62362 | 14549.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
