Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_102193 | Not Available | Negative | 673779 - 674399 | 22375.9 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_102194 | Not Available | Negative | 674405 - 675562 | 40161.4 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05444679_102195 | Not Available | Positive | 675621 - 676529 | 33516.6 |
| hypothetical protein | SAMN05444679_102196 | Not Available | Positive | 676612 - 677007 | 13952.7 |
| nucleoside-binding protein | SAMN05444679_102197 | Not Available | Positive | 677086 - 678183 | 39540.4 |
| transcriptional regulator, lysr family | SAMN05444679_102198 | Not Available | Negative | 678204 - 679127 | 33080.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_102199 | Not Available | Positive | 679184 - 679786 | 20770.8 |
| hypothetical protein | SAMN05444679_102200 | Not Available | Negative | 679834 - 680496 | 24256.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444679_102201 | Not Available | Negative | 680493 - 681638 | 42169.4 |
| guanine deaminase | SAMN05444679_102202 | Not Available | Positive | 681834 - 683114 | 46700.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
