Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444679_102183 | Not Available | Positive | 661528 - 662475 | 34981.5 |
| putative mfs transporter, agza family, xanthine/uracil permease | SAMN05444679_102184 | Not Available | Positive | 662550 - 663914 | 48172.0 |
| nucleoside abc transporter atp-binding protein | SAMN05444679_102185 | Not Available | Positive | 663980 - 665512 | 54636.3 |
| nucleoside abc transporter membrane protein | SAMN05444679_102186 | Not Available | Positive | 665505 - 666659 | 40381.6 |
| nucleoside abc transporter membrane protein | SAMN05444679_102187 | Not Available | Positive | 666745 - 667665 | 32229.1 |
| nucleoside-binding protein | SAMN05444679_102188 | Not Available | Positive | 667717 - 668886 | 41219.0 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444679_102189 | Not Available | Positive | 668953 - 669942 | 36002.7 |
| adenosine deaminase | SAMN05444679_102190 | Not Available | Positive | 669942 - 670982 | 38089.5 |
| sugar phosphate permease | SAMN05444679_102191 | Not Available | Negative | 671491 - 672762 | 43699.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_102192 | Not Available | Positive | 672844 - 673773 | 33283.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
