Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_1541 | Not Available | Negative | 6816989 - 6817221 | 9379.39 |
| hypothetical protein | SAMN05444679_1542 | Not Available | Negative | 6817459 - 6817821 | 13662.2 |
| acetyltransferase (gnat) domain-containing protein | SAMN05444679_1543 | Not Available | Positive | 6818746 - 6819624 | 30850.3 |
| hypothetical protein | SAMN05444679_1544 | Not Available | Positive | 6819630 - 6819818 | 7012.3 |
| d-isomer specific 2-hydroxyacid dehydrogenase, nad binding domain | SAMN05444679_1545 | Not Available | Positive | 6819827 - 6820243 | 14958.1 |
| hypothetical protein | SAMN05444679_1546 | Not Available | Positive | 6820376 - 6820503 | 4690.72 |
| amidase | SAMN05444679_1551 | Not Available | Negative | 6820504 - 6821948 | 50253.7 |
| transcriptional regulator, lysr family | SAMN05444679_1552 | Not Available | Positive | 6822044 - 6822932 | 32793.7 |
| hypothetical protein | SAMN05444679_1561 | Not Available | Positive | 6822933 - 6823051 | 4286.3 |
| methyl-accepting chemotaxis protein-2, aspartate sensor receptor | SAMN05444679_1562 | Not Available | Positive | 6823067 - 6825067 | 70017.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
