Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad+) | SAMN05444679_1522 | Not Available | Negative | 6808149 - 6809630 | 51970.1 |
| acetyltransferase (gnat) domain-containing protein | SAMN05444679_1523 | Not Available | Positive | 6809923 - 6810747 | 29072.2 |
| glyoxylate/hydroxypyruvate reductase a | SAMN05444679_1524 | Not Available | Positive | 6810747 - 6811688 | 34284.3 |
| selenocysteine lyase/cysteine desulfurase | SAMN05444679_1525 | Not Available | Positive | 6811693 - 6812856 | 43643.2 |
| hypothetical protein | SAMN05444679_1526 | Not Available | Positive | 6812994 - 6813166 | 6313.57 |
| lysr substrate binding domain-containing protein | SAMN05444679_1531 | Not Available | Positive | 6813167 - 6813314 | 5607.89 |
| hypothetical protein | SAMN05444679_1532 | Not Available | Negative | 6813445 - 6813564 | 4196.78 |
| hypothetical protein | SAMN05444679_1533 | Not Available | Negative | 6813778 - 6815352 | 57171.8 |
| hypothetical protein | SAMN05444679_1534 | Not Available | Negative | 6815393 - 6815803 | 15557.7 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444679_1535 | Not Available | Positive | 6816278 - 6816880 | 20886.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
