Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase | SAMN05444679_1502 | Not Available | Positive | 6794838 - 6796125 | 46376.3 |
| peptide/nickel transport system permease protein | SAMN05444679_1503 | Not Available | Positive | 6796447 - 6797352 | 32044.2 |
| peptide/nickel transport system permease protein | SAMN05444679_1504 | Not Available | Positive | 6797363 - 6798268 | 31299.8 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_1505 | Not Available | Positive | 6798268 - 6799893 | 58437.1 |
| isocitrate/isopropylmalate dehydrogenase | SAMN05444679_1506 | Not Available | Positive | 6799905 - 6800419 | 19251.0 |
| 3-isopropylmalate dehydrogenase/tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN05444679_1507 | Not Available | Positive | 6800724 - 6801088 | 12266.6 |
| aldehyde dehydrogenase family protein | SAMN05444679_1508 | Not Available | Positive | 6801096 - 6802096 | 35632.8 |
| Trna-ala | Not Available | Not Available | Positive | 6805573 - 6805648 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 6805676 - 6805752 | Not Available |
| hypothetical protein | SAMN05444679_1521 | Not Available | Negative | 6807742 - 6807974 | 9383.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
