Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase | SAMN05444679_1491 | Not Available | Negative | 6785063 - 6785539 | 17206.7 |
| transcriptional regulator, lysr family | SAMN05444679_1492 | Not Available | Positive | 6785744 - 6786703 | 36116.8 |
| hypothetical protein | SAMN05444679_1493 | Not Available | Positive | 6786858 - 6786983 | 4454.68 |
| hypothetical protein | SAMN05444679_1494 | Not Available | Positive | 6787062 - 6787478 | 15211.5 |
| flagellar hook-associated protein 3 flgl | SAMN05444679_1495 | Not Available | Negative | 6787515 - 6788726 | 41931.8 |
| flagellar hook-associated protein 1 flgk | SAMN05444679_1496 | Not Available | Negative | 6788744 - 6790702 | 67284.9 |
| methyl-accepting chemotaxis protein | SAMN05444679_1497 | Not Available | Negative | 6790761 - 6792338 | 55271.1 |
| methyl-accepting chemotaxis protein | SAMN05444679_1498 | Not Available | Negative | 6792429 - 6794165 | 61179.8 |
| hypothetical protein | SAMN05444679_1499 | Not Available | Negative | 6794169 - 6794287 | 4286.3 |
| 2-haloacid dehalogenase | SAMN05444679_1501 | Not Available | Positive | 6794288 - 6794815 | 19704.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
