Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_102173 | Not Available | Negative | 648117 - 649100 | 34441.9 |
| indolepyruvate ferredoxin oxidoreductase beta subunit | SAMN05444679_102174 | Not Available | Negative | 649121 - 650737 | 57651.5 |
| indolepyruvate ferredoxin oxidoreductase alpha subunit | SAMN05444679_102175 | Not Available | Negative | 650745 - 652898 | 77757.9 |
| cytochrome c553 | SAMN05444679_102176 | Not Available | Negative | 652918 - 653535 | 22163.5 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05444679_102177 | Not Available | Negative | 653535 - 654728 | 43638.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_102178 | Not Available | Positive | 654815 - 655726 | 33732.1 |
| orf6n domain-containing protein | SAMN05444679_102179 | Not Available | Positive | 655833 - 656432 | 22690.3 |
| transcriptional regulator, badm/rrf2 family | SAMN05444679_102180 | Not Available | Negative | 656584 - 657090 | 17838.2 |
| xanthine dehydrogenase small subunit | SAMN05444679_102181 | Not Available | Positive | 657375 - 658949 | 56760.1 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN05444679_102182 | Not Available | Positive | 658951 - 661377 | 86885.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
