Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase | SAMN05444679_1473 | Not Available | Negative | 6765812 - 6766783 | 33805.1 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN05444679_1474 | Not Available | Negative | 6766804 - 6767943 | 41279.6 |
| n-acyl-d-amino-acid deacylase | SAMN05444679_1475 | Not Available | Negative | 6767945 - 6769399 | 51862.1 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN05444679_1476 | Not Available | Negative | 6769423 - 6770538 | 39584.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_1477 | Not Available | Negative | 6770557 - 6771528 | 34103.7 |
| hypothetical protein | SAMN05444679_1478 | Not Available | Negative | 6771647 - 6772510 | 31236.8 |
| transcriptional regulator, arac family | SAMN05444679_1479 | Not Available | Negative | 6772678 - 6773640 | 35450.9 |
| transcriptional regulator, lysr family | SAMN05444679_14710 | Not Available | Positive | 6773759 - 6774673 | 34528.3 |
| hypothetical protein | SAMN05444679_14711 | Not Available | Negative | 6774670 - 6774783 | 4132.8 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN05444679_1481 | Not Available | Negative | 6775211 - 6775711 | 18540.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
