Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444679_1464 | Not Available | Positive | 6755549 - 6756049 | 17098.8 |
| uncharacterized metalloenzyme ydcj, glyoxalase superfamily | SAMN05444679_1465 | Not Available | Positive | 6756425 - 6757549 | 41555.3 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_1466 | Not Available | Positive | 6757772 - 6758947 | 41241.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_1467 | Not Available | Positive | 6759352 - 6760110 | 26352.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_1468 | Not Available | Positive | 6760261 - 6760941 | 24535.7 |
| arac family transcriptional regulator | SAMN05444679_1469 | Not Available | Negative | 6761118 - 6762056 | 34753.8 |
| feruloyl esterase | SAMN05444679_14610 | Not Available | Positive | 6762233 - 6763963 | 59876.6 |
| hypothetical protein | SAMN05444679_14611 | Not Available | Positive | 6764088 - 6764242 | 5466.82 |
| homeodomain-like domain-containing protein | SAMN05444679_1471 | Not Available | Negative | 6764293 - 6764736 | 16458.7 |
| transcriptional regulator, lysr family | SAMN05444679_1472 | Not Available | Negative | 6764894 - 6765802 | 33102.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
