Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | SAMN05444679_1455 | Not Available | Negative | 6744288 - 6745232 | 33294.9 |
| 4,5-dopa dioxygenase extradiol | SAMN05444679_1456 | Not Available | Positive | 6745451 - 6746356 | 32455.7 |
| alpha/beta hydrolase of unknown function | SAMN05444679_1457 | Not Available | Negative | 6746353 - 6747414 | 38211.4 |
| hypothetical protein | SAMN05444679_1458 | Not Available | Negative | 6747520 - 6749631 | 71891.5 |
| two component transcriptional regulator, luxr family | SAMN05444679_1459 | Not Available | Positive | 6749772 - 6750485 | 25728.9 |
| hypothetical protein | SAMN05444679_14510 | Not Available | Positive | 6750482 - 6752314 | 67742.1 |
| dde superfamily endonuclease | SAMN05444679_14511 | Not Available | Negative | 6752323 - 6752583 | 10319.5 |
| glutamate/aspartate transport system permease protein | SAMN05444679_1461 | Not Available | Positive | 6752717 - 6753409 | 25452.8 |
| glutamate/aspartate transport system atp-binding protein | SAMN05444679_1462 | Not Available | Positive | 6753428 - 6754156 | 26562.4 |
| diaminopropionate ammonia-lyase | SAMN05444679_1463 | Not Available | Positive | 6754264 - 6755499 | 44786.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
