Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05444679_1445 | Not Available | Negative | 6733647 - 6734993 | 49308.9 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05444679_1446 | Not Available | Negative | 6735032 - 6735859 | 28504.2 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_1447 | Not Available | Negative | 6735870 - 6737060 | 42676.0 |
| 3-methylfumaryl-coa hydratase | SAMN05444679_1448 | Not Available | Negative | 6737098 - 6737958 | 32293.5 |
| transcriptional regulatory protein, c terminal | SAMN05444679_1449 | Not Available | Negative | 6738345 - 6738965 | 22832.7 |
| protein of unknown function | SAMN05444679_14410 | Not Available | Positive | 6739339 - 6739839 | 18649.6 |
| hypothetical protein | SAMN05444679_1451 | Not Available | Positive | 6740594 - 6741586 | 36638.4 |
| hypothetical protein | SAMN05444679_1452 | Not Available | Positive | 6741580 - 6742365 | 28637.5 |
| hypothetical protein | SAMN05444679_1453 | Not Available | Positive | 6742362 - 6742763 | 15256.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_1454 | Not Available | Negative | 6742961 - 6743752 | 27083.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
