Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_14311 | Not Available | Positive | 6721119 - 6721949 | 28914.8 |
| acyl-coa dehydrogenase | SAMN05444679_14312 | Not Available | Positive | 6721953 - 6723104 | 42605.0 |
| alpha-methylacyl-coa racemase | SAMN05444679_14313 | Not Available | Positive | 6723101 - 6724144 | 36217.7 |
| crotonobetaine/carnitine-coa ligase | SAMN05444679_14314 | Not Available | Positive | 6724519 - 6726159 | 58870.2 |
| nitronate monooxygenase | SAMN05444679_14315 | Not Available | Positive | 6726226 - 6727146 | 32446.8 |
| hypothetical protein | SAMN05444679_14316 | Not Available | Negative | 6727554 - 6727688 | 5079.18 |
| outer membrane protein (porin) | SAMN05444679_1441 | Not Available | Negative | 6728151 - 6729443 | 44570.6 |
| hypothetical protein | SAMN05444679_1442 | Not Available | Negative | 6729565 - 6731589 | 71672.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_1443 | Not Available | Negative | 6731591 - 6732562 | 33843.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_1444 | Not Available | Positive | 6732713 - 6733642 | 34122.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
