Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_1431 | Not Available | Negative | 6713329 - 6713532 | 7414.08 |
| abc transporter substrate binding protein | SAMN05444679_1432 | Not Available | Positive | 6714151 - 6714660 | 18456.7 |
| tetratricopeptide repeat-containing protein | SAMN05444679_1433 | Not Available | Positive | 6714776 - 6716398 | 58992.9 |
| tpr repeat-containing protein | SAMN05444679_1434 | Not Available | Positive | 6716370 - 6716909 | 19814.8 |
| hypothetical protein | SAMN05444679_1435 | Not Available | Positive | 6717138 - 6717359 | 8023.97 |
| arac-type dna-binding protein | SAMN05444679_1436 | Not Available | Negative | 6717424 - 6718428 | 36922.7 |
| hypothetical protein | SAMN05444679_1437 | Not Available | Positive | 6718728 - 6718943 | 7825.21 |
| acetyl-coa acetyltransferase | SAMN05444679_1438 | Not Available | Positive | 6719027 - 6720211 | 41700.9 |
| acyl dehydratase | SAMN05444679_1439 | Not Available | Positive | 6720224 - 6720664 | 16046.1 |
| acyl dehydratase | SAMN05444679_14310 | Not Available | Positive | 6720677 - 6721096 | 15085.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
