Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_1413 | Not Available | Negative | 6678176 - 6679084 | 32480.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_1414 | Not Available | Positive | 6679184 - 6680074 | 32159.0 |
| sulfopyruvate decarboxylase, tpp-binding subunit (coenzyme m biosynthesis) | SAMN05444679_1415 | Not Available | Positive | 6680425 - 6680961 | 19365.5 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain | SAMN05444679_1416 | Not Available | Positive | 6681215 - 6681559 | 12148.7 |
| aldehyde dehydrogenase (nad+) | SAMN05444679_1417 | Not Available | Positive | 6681628 - 6683109 | 52608.9 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05444679_1418 | Not Available | Negative | 6683283 - 6683966 | 23989.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_1419 | Not Available | Negative | 6684023 - 6684988 | 34143.3 |
| transcriptional regulator, lysr family | SAMN05444679_14110 | Not Available | Negative | 6685678 - 6686619 | 35325.0 |
| uncharacterized domain 1-containing protein | SAMN05444679_14111 | Not Available | Negative | 6686875 - 6687300 | 15581.9 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_14112 | Not Available | Negative | 6687293 - 6688510 | 43959.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
