Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-methyltransferase involved in polyketide biosynthesis | SAMN05444679_102163 | Not Available | Positive | 639545 - 640381 | 31742.6 |
| uncharacterized conserved protein, duf2147 family | SAMN05444679_102164 | Not Available | Negative | 640385 - 640861 | 16713.0 |
| hypothetical protein | SAMN05444679_102165 | Not Available | Positive | 641072 - 641488 | 15594.5 |
| amidase | SAMN05444679_102166 | Not Available | Positive | 641603 - 642985 | 48872.5 |
| hypothetical protein | SAMN05444679_102167 | Not Available | Positive | 643081 - 643257 | 6620.84 |
| acetyltransferase (gnat) family protein | SAMN05444679_102168 | Not Available | Positive | 643286 - 643840 | 19586.4 |
| cytosine/adenosine deaminase | SAMN05444679_102169 | Not Available | Positive | 643880 - 645256 | 48957.0 |
| hypothetical protein | SAMN05444679_102170 | Not Available | Positive | 645369 - 646874 | 52047.1 |
| hypothetical protein | SAMN05444679_102171 | Not Available | Negative | 646921 - 647307 | 14916.6 |
| 4-hydroxybenzoyl-coa thioesterase | SAMN05444679_102172 | Not Available | Negative | 647680 - 648093 | 15634.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
