Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13828 | Not Available | Positive | 6632291 - 6633283 | 34859.8 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444679_13829 | Not Available | Negative | 6633296 - 6634123 | 30355.2 |
| short chain dehydrogenase | SAMN05444679_13830 | Not Available | Positive | 6634278 - 6634384 | 3653.56 |
| hypothetical protein | SAMN05444679_1391 | Not Available | Negative | 6634385 - 6634516 | 4863.59 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_1392 | Not Available | Negative | 6635112 - 6636005 | 32629.4 |
| hypothetical protein | SAMN05444679_1393 | Not Available | Positive | 6636039 - 6636908 | 29843.3 |
| 4-carboxymuconolactone decarboxylase | SAMN05444679_1394 | Not Available | Positive | 6636905 - 6637297 | 13966.0 |
| hypothetical protein | SAMN05444679_1395 | Not Available | Negative | 6637362 - 6637556 | 6843.16 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05444679_1396 | Not Available | Negative | 6637694 - 6638716 | 34455.1 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444679_1397 | Not Available | Negative | 6638713 - 6640329 | 57279.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
