Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_13818 | Not Available | Positive | 6621951 - 6622691 | 28030.9 |
| zn-finger domain of cdgsh type-containing protein | SAMN05444679_13819 | Not Available | Negative | 6622850 - 6623077 | 8367.93 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05444679_13820 | Not Available | Positive | 6623368 - 6624786 | 48695.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_13821 | Not Available | Negative | 6624756 - 6625667 | 33121.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13822 | Not Available | Positive | 6625799 - 6626776 | 33653.0 |
| 3-methylfumaryl-coa hydratase | SAMN05444679_13823 | Not Available | Positive | 6626781 - 6627671 | 32613.8 |
| acyl-coa dehydrogenase | SAMN05444679_13824 | Not Available | Positive | 6627679 - 6628848 | 43053.4 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_13825 | Not Available | Positive | 6628862 - 6630043 | 42119.2 |
| 2-methylcitrate dehydratase prpd | SAMN05444679_13826 | Not Available | Positive | 6630045 - 6631400 | 47552.3 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05444679_13827 | Not Available | Positive | 6631397 - 6632257 | 29863.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
