Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type multidrug transport system, atpase and permease component | SAMN05444679_1388 | Not Available | Negative | 6612896 - 6614659 | 63197.6 |
| crea protein | SAMN05444679_1389 | Not Available | Negative | 6614705 - 6615175 | 16760.5 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05444679_13810 | Not Available | Negative | 6615172 - 6615723 | 20986.1 |
| fumarylpyruvate hydrolase | SAMN05444679_13811 | Not Available | Negative | 6615817 - 6616518 | 24904.0 |
| maleylacetoacetate isomerase | SAMN05444679_13812 | Not Available | Positive | 6616607 - 6617260 | 24572.7 |
| conserved hypothetical protein | SAMN05444679_13813 | Not Available | Positive | 6617257 - 6618003 | 26052.8 |
| hypothetical protein | SAMN05444679_13814 | Not Available | Negative | 6617935 - 6618231 | 10421.7 |
| polyhydroxyalkanoate synthase | SAMN05444679_13815 | Not Available | Positive | 6618344 - 6620068 | 63257.1 |
| acetyl-coa acetyltransferase | SAMN05444679_13816 | Not Available | Positive | 6620108 - 6621286 | 40331.9 |
| ala-trna(pro) deacylase | SAMN05444679_13817 | Not Available | Positive | 6621440 - 6621919 | 17847.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
