Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain acyl-coa synthetase | SAMN05444679_13730 | Not Available | Negative | 6605721 - 6607223 | 53243.4 |
| hypothetical protein | SAMN05444679_13731 | Not Available | Positive | 6607440 - 6607859 | 15106.0 |
| endoribonuclease l-psp | SAMN05444679_13732 | Not Available | Negative | 6607878 - 6608090 | 7778.25 |
| hypothetical protein | SAMN05444679_1381 | Not Available | Negative | 6608187 - 6608299 | 4112.07 |
| hydroxyquinol 1,2-dioxygenase | SAMN05444679_1382 | Not Available | Positive | 6608426 - 6609295 | 32019.8 |
| chromate reductase | SAMN05444679_1383 | Not Available | Positive | 6609348 - 6609908 | 20341.8 |
| hypothetical protein | SAMN05444679_1384 | Not Available | Negative | 6609883 - 6610152 | 9681.45 |
| uncharacterized protein, duf1810 family | SAMN05444679_1385 | Not Available | Positive | 6610272 - 6610709 | 16348.4 |
| putative cardiolipin synthase | SAMN05444679_1386 | Not Available | Positive | 6610699 - 6612321 | 59688.7 |
| lipoprotein nlpd | SAMN05444679_1387 | Not Available | Negative | 6612318 - 6612833 | 18034.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
