Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | SAMN05444679_13710 | Not Available | Negative | 6587294 - 6588403 | 39549.6 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN05444679_13711 | Not Available | Positive | 6588544 - 6590154 | 58773.4 |
| protein of unknown function | SAMN05444679_13712 | Not Available | Positive | 6590157 - 6590573 | 15691.6 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05444679_13713 | Not Available | Negative | 6590589 - 6591398 | 28057.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13714 | Not Available | Negative | 6591510 - 6592484 | 34124.9 |
| acyl-coa dehydrogenase | SAMN05444679_13715 | Not Available | Negative | 6592517 - 6593671 | 41920.8 |
| acetyl-coa acetyltransferase | SAMN05444679_13716 | Not Available | Negative | 6593682 - 6594860 | 41002.4 |
| hypothetical protein | SAMN05444679_13717 | Not Available | Negative | 6594916 - 6595320 | 14502.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_13718 | Not Available | Negative | 6595329 - 6596243 | 32453.7 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN05444679_13719 | Not Available | Negative | 6596249 - 6597049 | 28136.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
