Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | SAMN05444679_13642 | Not Available | Positive | 6580000 - 6580244 | 9339.83 |
| aldehyde dehydrogenase family protein | SAMN05444679_1371 | Not Available | Positive | 6580245 - 6580829 | 20798.7 |
| cysteine synthase a | SAMN05444679_1372 | Not Available | Positive | 6580909 - 6581910 | 35775.5 |
| nadph2:quinone reductase | SAMN05444679_1373 | Not Available | Negative | 6581919 - 6582914 | 34710.5 |
| amino acid synthesis | SAMN05444679_1374 | Not Available | Negative | 6582928 - 6583506 | 20797.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_1375 | Not Available | Negative | 6583514 - 6584482 | 33564.7 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444679_1376 | Not Available | Negative | 6584551 - 6585414 | 31420.5 |
| catechol 2,3-dioxygenase | SAMN05444679_1377 | Not Available | Negative | 6585468 - 6586019 | 20370.2 |
| transcriptional regulator, gntr family | SAMN05444679_1378 | Not Available | Negative | 6586021 - 6586734 | 26589.6 |
| cupin domain-containing protein | SAMN05444679_1379 | Not Available | Negative | 6586738 - 6587280 | 19380.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
