Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine dioxygenase | SAMN05444679_13622 | Not Available | Negative | 6559356 - 6560204 | 31901.9 |
| arac-type dna-binding protein | SAMN05444679_13623 | Not Available | Positive | 6560322 - 6561371 | 38636.7 |
| beta-lactamase | SAMN05444679_13624 | Not Available | Positive | 6561513 - 6562622 | 40313.3 |
| catechol 2,3-dioxygenase | SAMN05444679_13625 | Not Available | Positive | 6562827 - 6563195 | 14044.7 |
| hypothetical protein | SAMN05444679_13626 | Not Available | Positive | 6563332 - 6563718 | 13994.3 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN05444679_13627 | Not Available | Negative | 6563812 - 6564315 | 17410.2 |
| phage integrase family protein | SAMN05444679_13628 | Not Available | Positive | 6564669 - 6564986 | 11784.4 |
| acetyl esterase | SAMN05444679_13629 | Not Available | Positive | 6565403 - 6566302 | 32390.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_13630 | Not Available | Negative | 6566871 - 6567803 | 34227.8 |
| l-threonine ammonia-lyase | SAMN05444679_13631 | Not Available | Positive | 6567903 - 6568877 | 33676.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
