Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_1362 | Not Available | Negative | 6536324 - 6536944 | 22023.2 |
| chorismate mutase | SAMN05444679_1363 | Not Available | Negative | 6537061 - 6537465 | 14632.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_1364 | Not Available | Negative | 6537477 - 6538526 | 36257.0 |
| res domain-containing protein | SAMN05444679_1365 | Not Available | Negative | 6538586 - 6539257 | 24792.5 |
| hypothetical protein | SAMN05444679_1366 | Not Available | Negative | 6539254 - 6539892 | 23443.0 |
| toxin ccdb | SAMN05444679_1367 | Not Available | Negative | 6541136 - 6541465 | 11827.2 |
| hypothetical protein | SAMN05444679_1368 | Not Available | Negative | 6542176 - 6542847 | 24974.2 |
| dna binding domain-containing protein, excisionase family | SAMN05444679_1369 | Not Available | Negative | 6542851 - 6543315 | 17020.6 |
| hypothetical protein | SAMN05444679_13610 | Not Available | Positive | 6544546 - 6545199 | 23594.1 |
| chromosome partitioning protein, parb family | SAMN05444679_13611 | Not Available | Negative | 6545410 - 6546456 | 38290.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
