Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444679_13536 | Not Available | Negative | 6524589 - 6525593 | 36789.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13537 | Not Available | Positive | 6525659 - 6526678 | 34885.2 |
| homoserine o-acetyltransferase | SAMN05444679_13538 | Not Available | Positive | 6526680 - 6527702 | 37463.0 |
| feruloyl esterase | SAMN05444679_13539 | Not Available | Positive | 6527731 - 6529578 | 63534.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_13540 | Not Available | Negative | 6529697 - 6530515 | 30111.1 |
| citrate lyase subunit alpha / citrate coa-transferase | SAMN05444679_13541 | Not Available | Negative | 6530643 - 6532193 | 53814.6 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05444679_13542 | Not Available | Negative | 6532200 - 6533051 | 29595.7 |
| hypothetical protein | SAMN05444679_13543 | Not Available | Negative | 6533069 - 6533734 | 23405.3 |
| hypothetical protein | SAMN05444679_13544 | Not Available | Negative | 6533739 - 6533867 | 4462.4 |
| cupin domain-containing protein | SAMN05444679_1361 | Not Available | Negative | 6534961 - 6535272 | 11320.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
