Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | SAMN05444679_13526 | Not Available | Positive | 6514937 - 6515404 | 16669.8 |
| demethylmenaquinone methyltransferase | SAMN05444679_13527 | Not Available | Positive | 6515476 - 6516174 | 25437.4 |
| predicted dehydrogenase | SAMN05444679_13528 | Not Available | Positive | 6516180 - 6517151 | 34790.6 |
| predicted dehydrogenase | SAMN05444679_13529 | Not Available | Positive | 6517144 - 6518112 | 34455.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN05444679_13530 | Not Available | Positive | 6518109 - 6519248 | 41194.3 |
| glycerate dehydrogenase | SAMN05444679_13531 | Not Available | Negative | 6519329 - 6520297 | 34687.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13532 | Not Available | Negative | 6520343 - 6521326 | 35570.3 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444679_13533 | Not Available | Negative | 6521360 - 6522385 | 38540.3 |
| gluconolactonase | SAMN05444679_13534 | Not Available | Negative | 6522483 - 6523454 | 35451.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13535 | Not Available | Negative | 6523462 - 6524439 | 34209.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
