Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05444679_13516 | Not Available | Positive | 6500565 - 6501611 | 37348.9 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444679_13517 | Not Available | Positive | 6501608 - 6503134 | 54356.1 |
| ribose transport system permease protein | SAMN05444679_13518 | Not Available | Positive | 6503131 - 6504162 | 35841.3 |
| predicted oxidoreductase | SAMN05444679_13519 | Not Available | Positive | 6504159 - 6505139 | 35273.1 |
| fructose-bisphosphate aldolase class ia, dhna family | SAMN05444679_13520 | Not Available | Positive | 6505183 - 6506040 | 31305.8 |
| dna-binding beta-propeller fold protein ynce | SAMN05444679_13521 | Not Available | Positive | 6506193 - 6510602 | 158578.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13522 | Not Available | Negative | 6511039 - 6511989 | 33391.6 |
| transcriptional regulator, lysr family | SAMN05444679_13523 | Not Available | Negative | 6512108 - 6513082 | 35822.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13524 | Not Available | Negative | 6513136 - 6514092 | 33833.1 |
| cupin domain-containing protein | SAMN05444679_13525 | Not Available | Positive | 6514337 - 6514891 | 19692.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
