Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_1356 | Not Available | Negative | 6488423 - 6489370 | 32666.6 |
| n-acyl-l-homoserine lactone synthetase | SAMN05444679_1357 | Not Available | Positive | 6489678 - 6490301 | 22681.3 |
| luxr family transcriptional regulator | SAMN05444679_1358 | Not Available | Negative | 6490308 - 6491015 | 26245.5 |
| hypothetical protein | SAMN05444679_1359 | Not Available | Negative | 6491072 - 6491248 | 6393.72 |
| gntr family transcriptional regulator | SAMN05444679_13510 | Not Available | Negative | 6491567 - 6492307 | 27511.2 |
| glycerol-3-phosphate dehydrogenase | SAMN05444679_13511 | Not Available | Negative | 6492327 - 6494090 | 63388.4 |
| l-xylulokinase | SAMN05444679_13512 | Not Available | Negative | 6494087 - 6495574 | 50317.6 |
| hypothetical protein | SAMN05444679_13513 | Not Available | Positive | 6495753 - 6495866 | 3702.44 |
| choline dehydrogenase | SAMN05444679_13514 | Not Available | Positive | 6495964 - 6497622 | 60517.8 |
| glycerol-3-phosphate dehydrogenase | SAMN05444679_13515 | Not Available | Negative | 6498315 - 6500081 | 64664.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
