Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | SAMN05444679_13451 | Not Available | Positive | 6478953 - 6479243 | 10403.3 |
| hypothetical protein | SAMN05444679_13452 | Not Available | Negative | 6479865 - 6480413 | 17120.2 |
| hypothetical protein | SAMN05444679_13453 | Not Available | Negative | 6481711 - 6482046 | 11783.3 |
| hypothetical protein | SAMN05444679_13454 | Not Available | Positive | 6482859 - 6483662 | 29760.7 |
| hypothetical protein | SAMN05444679_13455 | Not Available | Positive | 6483659 - 6484035 | 10791.2 |
| homeodomain-like domain-containing protein | SAMN05444679_1351 | Not Available | Negative | 6484086 - 6484529 | 16386.6 |
| hypothetical protein | SAMN05444679_1352 | Not Available | Negative | 6484668 - 6486062 | 51399.6 |
| hypothetical protein | SAMN05444679_1353 | Not Available | Negative | 6486639 - 6487244 | 22263.7 |
| cupin domain-containing protein | SAMN05444679_1354 | Not Available | Negative | 6487270 - 6487734 | 16634.3 |
| chorismate mutase | SAMN05444679_1355 | Not Available | Negative | 6488052 - 6488426 | 13826.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
