Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444679_102143 | Not Available | Positive | 623724 - 625208 | 53890.8 |
| transcriptional regulator, hxlr family | SAMN05444679_102144 | Not Available | Negative | 625205 - 625897 | 26221.5 |
| methyltransferase domain-containing protein | SAMN05444679_102145 | Not Available | Positive | 626008 - 626877 | 30738.8 |
| carboxypeptidase ss1. metallo peptidase. merops family m20d | SAMN05444679_102146 | Not Available | Negative | 626882 - 628231 | 47063.5 |
| transcriptional regulator, lysr family | SAMN05444679_102147 | Not Available | Positive | 628405 - 629295 | 31714.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_102148 | Not Available | Negative | 629336 - 630301 | 34560.7 |
| formyl-coa transferase | SAMN05444679_102149 | Not Available | Positive | 630423 - 631580 | 41582.6 |
| hydroxymethylglutaryl-coa lyase | SAMN05444679_102150 | Not Available | Positive | 631593 - 632573 | 34964.9 |
| catechol 2,3-dioxygenase | SAMN05444679_102151 | Not Available | Positive | 632570 - 632950 | 13987.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_102152 | Not Available | Positive | 632995 - 633963 | 34102.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
