Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formaldehyde activating enzyme | SAMN05444679_13431 | Not Available | Positive | 6459640 - 6460152 | 18028.7 |
| dihydroneopterin aldolase | SAMN05444679_13432 | Not Available | Negative | 6460235 - 6460747 | 18936.7 |
| transcriptional regulator of acetoin/glycerol metabolism | SAMN05444679_13433 | Not Available | Positive | 6460961 - 6463006 | 74912.6 |
| flavoprotein | SAMN05444679_13434 | Not Available | Positive | 6463026 - 6463679 | 23384.2 |
| dihydropteroate synthase-related protein | SAMN05444679_13435 | Not Available | Positive | 6463658 - 6465094 | 52257.6 |
| hypothetical protein | SAMN05444679_13436 | Not Available | Positive | 6465091 - 6465684 | 21693.1 |
| uncharacterized protein, upf0264 family | SAMN05444679_13437 | Not Available | Positive | 6465681 - 6466385 | 24176.7 |
| amino acid kinase family protein | SAMN05444679_13438 | Not Available | Negative | 6466405 - 6467004 | 21561.0 |
| probable h4mpt-linked c1 transfer pathway protein | SAMN05444679_13439 | Not Available | Negative | 6467004 - 6468089 | 38416.6 |
| predicted atp-dependent carboligase, atp-grasp superfamily | SAMN05444679_13440 | Not Available | Negative | 6468070 - 6469056 | 35079.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
