Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_13347 | Not Available | Negative | 6412927 - 6413199 | 9498.22 |
| hypothetical protein | SAMN05444679_13348 | Not Available | Negative | 6413212 - 6413517 | 11547.9 |
| hypothetical protein | SAMN05444679_13349 | Not Available | Positive | 6413812 - 6414231 | 15674.5 |
| hypothetical protein | SAMN05444679_13350 | Not Available | Positive | 6414312 - 6414611 | 10993.0 |
| dna-binding beta-propeller fold protein ynce | SAMN05444679_13351 | Not Available | Positive | 6414713 - 6415900 | 41641.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_13352 | Not Available | Negative | 6415908 - 6416822 | 33329.9 |
| 4fe-4s binding domain-containing protein | SAMN05444679_13353 | Not Available | Negative | 6416850 - 6417176 | 11712.9 |
| crotonobetainyl-coa hydratase | SAMN05444679_13354 | Not Available | Negative | 6417189 - 6417965 | 27988.3 |
| formyl-coa transferase | SAMN05444679_13355 | Not Available | Negative | 6417962 - 6419125 | 42174.8 |
| fad dependent oxidoreductase | SAMN05444679_13356 | Not Available | Negative | 6419125 - 6420504 | 50243.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
