Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase | SAMN05444679_13337 | Not Available | Positive | 6401230 - 6402012 | 28966.3 |
| pyruvate kinase | SAMN05444679_13338 | Not Available | Positive | 6402060 - 6403475 | 50153.8 |
| transcriptional regulator, rpir family | SAMN05444679_13339 | Not Available | Positive | 6403890 - 6404846 | 33638.4 |
| beta-aspartyl-peptidase (threonine type) | SAMN05444679_13340 | Not Available | Positive | 6404843 - 6405811 | 33012.3 |
| glutathione transport system atp-binding protein | SAMN05444679_13341 | Not Available | Positive | 6405823 - 6407718 | 68772.8 |
| glutathione transport system substrate-binding protein | SAMN05444679_13342 | Not Available | Positive | 6407756 - 6409303 | 56588.4 |
| glutathione transport system permease protein | SAMN05444679_13343 | Not Available | Positive | 6409323 - 6410243 | 33825.4 |
| glutathione transport system permease protein | SAMN05444679_13344 | Not Available | Positive | 6410257 - 6411126 | 31352.0 |
| l-aminopeptidase dmpa. serine peptidase. merops family s58 | SAMN05444679_13345 | Not Available | Positive | 6411130 - 6412149 | 34950.0 |
| d-aminopeptidase dppa. metallo peptidase. merops family m55 | SAMN05444679_13346 | Not Available | Positive | 6412146 - 6412964 | 28861.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
