Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | SAMN05444679_13327 | Not Available | Positive | 6391690 - 6392739 | 38753.1 |
| methyltransferase domain-containing protein | SAMN05444679_13328 | Not Available | Negative | 6392760 - 6393368 | 21898.1 |
| hypothetical protein | SAMN05444679_13329 | Not Available | Negative | 6393346 - 6393558 | 7666.19 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444679_13330 | Not Available | Positive | 6393786 - 6394388 | 22328.8 |
| cytochrome c | SAMN05444679_13331 | Not Available | Positive | 6394423 - 6395706 | 44140.3 |
| transcriptional regulator, laci family | SAMN05444679_13332 | Not Available | Negative | 6395729 - 6396745 | 36244.7 |
| d-galactonate transporter | SAMN05444679_13333 | Not Available | Positive | 6397044 - 6398354 | 47709.2 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444679_13334 | Not Available | Positive | 6398365 - 6399255 | 30490.9 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN05444679_13335 | Not Available | Positive | 6399252 - 6400565 | 45697.6 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444679_13336 | Not Available | Positive | 6400562 - 6401209 | 23646.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
