Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna 3'-terminal phosphate cyclase (atp) | SAMN05444679_13317 | Not Available | Negative | 6381209 - 6382261 | 36952.1 |
| probable zinc-ribbon domain-containing protein | SAMN05444679_13318 | Not Available | Negative | 6382284 - 6382931 | 23986.6 |
| pp_06229 | SAMN05444679_13319 | Not Available | Negative | 6382950 - 6384173 | Not Available |
| transcriptional regulatory protein rtcr | SAMN05444679_13320 | Not Available | Positive | 6384391 - 6385992 | 59381.8 |
| ornithine cyclodeaminase | SAMN05444679_13321 | Not Available | Positive | 6386006 - 6386947 | 32954.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13322 | Not Available | Negative | 6386944 - 6387921 | 34889.7 |
| acetyl-coa c-acetyltransferase | SAMN05444679_13323 | Not Available | Negative | 6388043 - 6389248 | 41792.3 |
| 3-oxoadipate coa-transferase beta subunit | SAMN05444679_13324 | Not Available | Negative | 6389274 - 6389918 | 22586.3 |
| 3-oxoadipate coa-transferase alpha subunit | SAMN05444679_13325 | Not Available | Negative | 6389921 - 6390622 | 24720.8 |
| transcriptional regulator, iclr family | SAMN05444679_13326 | Not Available | Positive | 6390728 - 6391513 | 28246.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
