Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit beta / citryl-coa lyase | SAMN05444679_102133 | Not Available | Positive | 612783 - 613655 | 30732.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_102134 | Not Available | Positive | 613705 - 614712 | 34624.9 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05444679_102135 | Not Available | Positive | 614709 - 615587 | 31591.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_102136 | Not Available | Positive | 615629 - 616612 | 34300.7 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_102137 | Not Available | Positive | 616629 - 617843 | 43615.4 |
| transcriptional regulator, tetr family | SAMN05444679_102138 | Not Available | Negative | 617853 - 618554 | 25264.0 |
| hlyd family secretion protein | SAMN05444679_102139 | Not Available | Positive | 618663 - 619691 | 36885.3 |
| abc-2 type transport system atp-binding protein | SAMN05444679_102140 | Not Available | Positive | 619691 - 621451 | 63573.9 |
| abc-2 type transport system permease protein | SAMN05444679_102141 | Not Available | Positive | 621448 - 622569 | 40449.9 |
| abc-2 type transport system permease protein | SAMN05444679_102142 | Not Available | Positive | 622580 - 623710 | 40606.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
