Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_1337 | Not Available | Negative | 6373140 - 6373898 | 27230.3 |
| putative oxidoreductase | SAMN05444679_1338 | Not Available | Positive | 6374063 - 6374509 | 14872.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444679_1339 | Not Available | Negative | 6374519 - 6375232 | 26305.9 |
| adenylate cyclase | SAMN05444679_13310 | Not Available | Positive | 6375285 - 6376925 | 59583.5 |
| hypothetical protein | SAMN05444679_13311 | Not Available | Positive | 6377035 - 6377496 | 15924.9 |
| hypothetical protein | SAMN05444679_13312 | Not Available | Negative | 6377504 - 6377776 | 10361.4 |
| fad binding domain-containing protein | SAMN05444679_13313 | Not Available | Negative | 6378228 - 6378710 | 16787.2 |
| 2,3-dihydroxybenzoate decarboxylase | SAMN05444679_13314 | Not Available | Negative | 6378707 - 6379678 | 36647.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13315 | Not Available | Negative | 6379686 - 6380675 | 34295.6 |
| dna-binding transcriptional regulator, marr family | SAMN05444679_13316 | Not Available | Positive | 6380749 - 6381198 | 16404.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
