Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13259 | Not Available | Negative | 6360332 - 6361351 | 35643.4 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444679_13260 | Not Available | Negative | 6361355 - 6362131 | 27930.0 |
| hypothetical protein | SAMN05444679_13261 | Not Available | Negative | 6362679 - 6366362 | 137464.0 |
| hypothetical protein | SAMN05444679_13262 | Not Available | Negative | 6366362 - 6367732 | 49858.3 |
| hypothetical protein | SAMN05444679_1331 | Not Available | Positive | 6368320 - 6368487 | 5793.89 |
| feruloyl esterase | SAMN05444679_1332 | Not Available | Positive | 6368490 - 6370190 | 58379.9 |
| acyl-coa dehydrogenase | SAMN05444679_1333 | Not Available | Positive | 6370187 - 6371911 | 62581.5 |
| transcriptional regulator, marr family | SAMN05444679_1334 | Not Available | Positive | 6371961 - 6372443 | 17470.2 |
| hypothetical protein | SAMN05444679_1335 | Not Available | Negative | 6372440 - 6372808 | 13822.6 |
| hypothetical protein | SAMN05444679_1336 | Not Available | Negative | 6372837 - 6373106 | 10179.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
