Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yurz, alkylhydroperoxidase/carboxymuconolactone decarboxylase family | SAMN05444679_13249 | Not Available | Positive | 6349853 - 6350638 | 27267.7 |
| alpha/beta hydrolase family protein | SAMN05444679_13250 | Not Available | Positive | 6350641 - 6351717 | 39409.1 |
| hypothetical protein | SAMN05444679_13251 | Not Available | Positive | 6351830 - 6352885 | 38447.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_13252 | Not Available | Positive | 6353392 - 6354360 | 35038.3 |
| 4-carboxymuconolactone decarboxylase | SAMN05444679_13253 | Not Available | Positive | 6354469 - 6355041 | 20667.9 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05444679_13254 | Not Available | Positive | 6355038 - 6355871 | 29727.7 |
| glutathione s-transferase | SAMN05444679_13255 | Not Available | Negative | 6355891 - 6356508 | 22943.8 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_13256 | Not Available | Negative | 6356508 - 6357737 | 44124.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13257 | Not Available | Positive | 6357941 - 6358912 | 33668.0 |
| acyl-coa dehydrogenase | SAMN05444679_13258 | Not Available | Negative | 6358986 - 6360212 | 45451.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
