Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein (porin) | SAMN05444679_13239 | Not Available | Positive | 6341887 - 6342930 | 36809.5 |
| 4-carboxymuconolactone decarboxylase | SAMN05444679_13240 | Not Available | Positive | 6342973 - 6343356 | 14277.3 |
| cupin domain protein | SAMN05444679_13241 | Not Available | Negative | 6343413 - 6343886 | 16388.6 |
| protein of unknown function | SAMN05444679_13242 | Not Available | Negative | 6343889 - 6344638 | 27917.0 |
| cytochrome p460 | SAMN05444679_13243 | Not Available | Negative | 6344666 - 6345115 | 17097.1 |
| predicted oxidoreductase | SAMN05444679_13244 | Not Available | Negative | 6345220 - 6346272 | 38600.6 |
| flavodoxin | SAMN05444679_13245 | Not Available | Negative | 6346242 - 6346715 | 17206.5 |
| predicted oxidoreductase | SAMN05444679_13246 | Not Available | Negative | 6346855 - 6347844 | 35862.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_13247 | Not Available | Positive | 6347920 - 6348822 | 33625.7 |
| transcriptional regulator, lysr family | SAMN05444679_13248 | Not Available | Positive | 6348835 - 6349728 | 32891.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
