Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05444679_13229 | Not Available | Positive | 6330970 - 6332172 | 43723.2 |
| 3-hydroxybutyryl-coa dehydratase | SAMN05444679_13230 | Not Available | Negative | 6332189 - 6332623 | 15131.3 |
| formyl-coa transferase | SAMN05444679_13231 | Not Available | Negative | 6332727 - 6333935 | 43388.3 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05444679_13232 | Not Available | Negative | 6333955 - 6334797 | 29956.9 |
| alcohol dehydrogenase, class iv | SAMN05444679_13233 | Not Available | Negative | 6334821 - 6336026 | 41610.4 |
| acyl-coa dehydrogenase | SAMN05444679_13234 | Not Available | Negative | 6336026 - 6337204 | 42958.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_13235 | Not Available | Positive | 6337351 - 6338259 | 32869.4 |
| acetyl-coa hydrolase | SAMN05444679_13236 | Not Available | Positive | 6338343 - 6339608 | 44906.0 |
| short chain enoyl-coa hydratase | SAMN05444679_13237 | Not Available | Positive | 6339605 - 6340393 | 27310.5 |
| lactonase | SAMN05444679_13238 | Not Available | Positive | 6340506 - 6341579 | 37944.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
