Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | SAMN05444679_1329 | Not Available | Negative | 6308441 - 6309577 | 39151.5 |
| alcohol dehydrogenase | SAMN05444679_13210 | Not Available | Negative | 6309772 - 6310902 | 39358.7 |
| acyl-coa reductase | SAMN05444679_13211 | Not Available | Negative | 6310920 - 6312362 | 51349.9 |
| 2-methylcitrate dehydratase prpd | SAMN05444679_13212 | Not Available | Positive | 6312614 - 6314044 | 50766.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_13213 | Not Available | Positive | 6314135 - 6315094 | 33294.6 |
| hypothetical protein | SAMN05444679_13214 | Not Available | Positive | 6315132 - 6316913 | 63385.2 |
| hypothetical protein | SAMN05444679_13215 | Not Available | Positive | 6316916 - 6317332 | 15073.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_13216 | Not Available | Negative | 6317343 - 6318260 | 33744.7 |
| glutathione s-transferase, n-terminal domain | SAMN05444679_13217 | Not Available | Negative | 6318350 - 6318970 | 22658.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_13218 | Not Available | Negative | 6318982 - 6319710 | 25149.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
