Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pld-like domain-containing protein | SAMN05444679_13161 | Not Available | Negative | 6297315 - 6299039 | 61482.5 |
| atp-binding cassette, subfamily f, uup | SAMN05444679_13162 | Not Available | Negative | 6299114 - 6301021 | 69439.4 |
| hypothetical protein | SAMN05444679_1321 | Not Available | Positive | 6301265 - 6301359 | 3567.44 |
| aldehyde dehydrogenase (nad+) | SAMN05444679_1322 | Not Available | Positive | 6301852 - 6303333 | 51983.4 |
| hypothetical protein | SAMN05444679_1323 | Not Available | Positive | 6303376 - 6303909 | 18309.9 |
| glycine/d-amino acid oxidase | SAMN05444679_1324 | Not Available | Positive | 6303930 - 6305255 | 47366.5 |
| fad dependent oxidoreductase | SAMN05444679_1325 | Not Available | Positive | 6305287 - 6305523 | 8319.77 |
| glutathione s-transferase, n-terminal domain | SAMN05444679_1326 | Not Available | Negative | 6305508 - 6305693 | 6664.02 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_1327 | Not Available | Negative | 6306347 - 6307318 | 34265.8 |
| lactonase | SAMN05444679_1328 | Not Available | Negative | 6307427 - 6308389 | 33785.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
