Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444679_13151 | Not Available | Negative | 6288844 - 6289479 | 22461.4 |
| glyoxalase-like domain-containing protein | SAMN05444679_13152 | Not Available | Negative | 6289481 - 6290167 | 24416.2 |
| phenazine biosynthesis protein phzf family | SAMN05444679_13153 | Not Available | Negative | 6290176 - 6291087 | 32057.4 |
| glutathione s-transferase | SAMN05444679_13154 | Not Available | Negative | 6291093 - 6291734 | 23990.6 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444679_13155 | Not Available | Negative | 6291737 - 6292375 | 22536.3 |
| dj-1/pfpi family protein | SAMN05444679_13156 | Not Available | Negative | 6292372 - 6292983 | 21070.6 |
| 2-aminoadipate transaminase | SAMN05444679_13157 | Not Available | Negative | 6293008 - 6294222 | 43333.5 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444679_13158 | Not Available | Negative | 6294248 - 6295177 | 32612.8 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444679_13159 | Not Available | Negative | 6295174 - 6295773 | 21429.9 |
| transcriptional regulator, gntr family | SAMN05444679_13160 | Not Available | Positive | 6295876 - 6297303 | 51805.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
