Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444679_13141 | Not Available | Positive | 6278776 - 6279684 | 33044.6 |
| creatinine amidohydrolase | SAMN05444679_13142 | Not Available | Positive | 6279708 - 6280526 | 28175.7 |
| hypothetical protein | SAMN05444679_13143 | Not Available | Negative | 6280533 - 6281162 | 21307.3 |
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN05444679_13144 | Not Available | Positive | 6281278 - 6281523 | 8355.54 |
| hypothetical protein | SAMN05444679_13145 | Not Available | Positive | 6281539 - 6281871 | 12709.3 |
| divalent cation tolerance protein | SAMN05444679_13146 | Not Available | Positive | 6282020 - 6282352 | 12088.5 |
| broad specificity phosphatase phoe | SAMN05444679_13147 | Not Available | Negative | 6282343 - 6283017 | 24904.6 |
| outer membrane autotransporter barrel domain-containing protein | SAMN05444679_13148 | Not Available | Positive | 6283242 - 6287171 | 128322.0 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN05444679_13149 | Not Available | Positive | 6287224 - 6287862 | 23097.3 |
| threonine dehydratase | SAMN05444679_13150 | Not Available | Negative | 6287875 - 6288840 | 34102.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
